放流初期紫红笛鲷肠道菌群的时序重构与功能适应研究

Temporal reconstruction and functional adaptation of intestinal microbiota in Lutjanus argentimaculatus during initial stage of stock enhancement

  • 摘要: 紫红笛鲷 (Lutjanus argentimaculatus) 是南海重要的增殖放流物种,但其从人工环境转入自然海域后,肠道微生物群落的时序演替及其功能响应尚不明确。为此,本研究采集了养殖组及放流后回捕组4个时间点 (第1、第5、第15、第30天) 的肠道样本24个 (每个时间点n=3),以期揭示放流初期肠道菌群的适应性变化,为优化增殖放流技术策略提供参考。基于16S rDNA 高通量测序技术与 PICRUSt2功能预测分析发现:养殖组Shannon指数由第1天的1.99升至第30天的3.58,优势菌属由劳氏菌属 (Lawsonia) 转为光杆菌属 (Photobacterium),呈现多属共存趋势;回捕组的多样性呈先降后升趋势,第30天Shannon指数恢复至4.40,其中伯克霍尔德氏菌属 (Burkholderia-Caballeronia-Paraburkholderia) 与红球菌属 (Rhodococcus) 在回捕后显著富集。功能预测显示,养殖组主要富集能量合成与核苷酸代谢相关通路,而回捕组在芳香族化合物降解和复杂碳源利用等通路上显著增强。研究表明,放流初期紫红笛鲷肠道菌群经历了快速重构与合成导向向适应导向的功能转变,为优化增殖放流策略提供了一种新思路。

     

    Abstract: Lutjanus argentimaculatus is a key species in stock enhancement programs in the South China Sea, yet how its gut microbiota temporally restructures and functionally adapts after release from aquaculture to the natural environment is poorly understood. To investigate these early adaptive changes and to optimize stock enhancement strategies, we collected a total of 24 intestinal samples from cultured and recaptured fish at the 1st, 5th, 15th, and 30th day post-release (n=3 per time point). High-throughput 16S rDNA sequencing and PICRUSt2 analysis were used to reveal distinct dynamics: the cultured group showed a steady increase in Shannon diversity (1.99 to 3.58), accompanied by a shift in dominant genera from Lawsonia to Photobacterium, suggesting a progression toward multi-genus coexistence under stable rearing conditions. In contrast, the recaptured group exhibited a biphasic "decrease-increase" pattern in microbial diversity, recovering to a higher Shannon index (4.40) by day 30, accompanied by significant enrichment of Burkholderia-Caballeronia-Paraburkholderia and Rhodococcus. Functional prediction indicated that the cultured group's microbiota was enriched in biosynthesis pathways (e.g., energy synthesis and nucleotides), whereas the recaptured group's microbiota showed enhanced catabolic potential for aromatic compounds and complex carbon sources. These findings demonstrate that the gut microbiota of L. argentimaculatus undergoes rapid restructuring and a functional transition from a biosynthesis-oriented profile to an adaptation-oriented one, offering a new way for improving stock enhancement strategies.

     

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